Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799748.1_cds_XP_016466528.1_5885
CDS Infomation

[gene=LOC107789265] [db_xref=GeneID:107789265] [protein=ankyrin repeat domain-containing protein 13C-like] [protein_id=XP_016466528.1] [location=complement(join(17354..17605,18195..18249,19965..20323,21187..22584))] [gbkey=CDS]
Sequence

ATGTCGAAACCGGCGACAACGCCGGCGCCGGCATCTTCAACGACGATAAAGCCGGAAGAT
TACTCTCATAGCCCTGTACATTACGCCGTCGTTTTAGGCGATCACTCTACTCTAAGCAGA
CTCGTCGCTTCTGTTCCTCGACTCGTCGATCCAACTCAGATAAACACTGAGTCCCACTCG
CTTTCCCAGGAACGAATTGCAGATCAAATCTCCGCCGTCCTTGACCGCCGTGACAACCCT
AACCGTGAAACTCCATTACACCTCGCCGTCCGTTTGAATGACGTGTACGCTGCTCGGACT
CTTGCCGTTGCCGGCGCCGACATTTCGCTTCAGAATGCTGCTGGTTGGAATGCTCTACAG
GAAGCCATTATGCGGAGATGCTCCGACGTTGTTTCGGTTCTCGTCCAGCATCATCATTTA
GGTGCTTGGTCCAAGTGGCGCCGCCGTCTTCCTCGCCTTGTTGCTGTTCTCCGCAGAATG
CGTGATTTTTACATGGAGATTTCGTTCCATTTCGAGAGTTCTATTGTTCCGTTTGTCGGA
AAAATTGCGCCTTCTGATACGTATAAGATCTGGAAACGCGACGGCAATCTCCGAGCAGAT
ACTTCCTTAGCAGGTTACGACGGCTTGAAAATTCAGCGAGCTAATCAGAGTTTTCTCTTT
CTCGGTGACAGTGATCGGAATTTCGATATTCCGGCCGGTGCTTTGCTAGTTTTGAATCAT
GACGAGCGTAAAATTTATGATGCTTTTGAAAATGCCGGTGCTCCGTTGAGCGATTCCGAC
GTCGCGAGTTTCTGTAATCAAACAAGTGTGTATCGTCCTGGAATGGACGTGACAAAATCG
GCACTAGTCGGTCGTACGAATTGGAGAGGGCAAGACAAAACGGAGAACGTCGGTGAATGG
AAAGGTAGGGTTTACGATGTGCACAATGTTGTTTTCAGCTTCCGATCACGGAAAATCACC
GGAGCTGAAAGCGAACAAATTTTGCCATTAGACTTGGAACTCGAAGAGGATTCTGAAGAA
GGTTTCCTCGTAGCAGAAAATCCACGGTTTAGCGTCTCTACTCGCCCATCCGCTACCGGG
GAAGGTAACAGACAAAGACGCCACAGCAGTTTCATTCGAGAGGAGAGAGAGTTCGTTACC
GTATCCAGAAAGAGTGTCGACATTATTCCTGAACCACGGCGGAGAACGGCGGCGATACCG
GTTGCACCACCACCGAATACGAAGGAGAAAGAGTATGTGAAGAGTCTGAAACCGTCGGTT
TGGTTAACGGAGCAGTTCCCCTTGAAGACGGAGGAGTTGCTGCCGTTACTTGACATATTA
GCGAACAAGGTCAAAGCCGTTAGACGAATGAGAGAGCTGTTAACGACCAAGTTCCCTCCG
GGGACATTTCCAGTAAAGTTGGCTATACCGGTGGTCCCTACAGTGAGGGTGGTAATAACA
TTCACGAAATTTGTCGAGCTACAACCAATTGAACAGTTCTACACTCCATTTTCAAGTCCG
AGCCACCTTCTTAATGGTGCTGAGGATGAAAGTTCAGGCAGTAATTACCGTTCATTTCCA
TCATCGTCGTCTTCATCATCGTCGTCGTGGCTGTCGAGGAGCAATAGCCGGTCGCGCTCT
TCGAGCAAGCAGCCACAACAGAGCAGTAATGGAGGACAACAAGCAGATCCATTTGCAATA
CCTGGTGGATATAGTTGGAGTAGTTTTGATGAGAAGAATAGGAAAATGAAGAAATCTAAG
TCTACTAGGAGAACCAAATTTTCTGAATTCAAAGATGTTGAGGAAATGGAAAAAGAGGGG
AGCTCATATGAGGATTTAATTATGGCTACTAATGGACCAAGTTGGGCAGATCAATGGGGT
GCAGGAGGAATAGGTGCCATAGATGAAGATGAGAGCTATTATAAGAGCAACAAAGAAAAT
GGAAATAACAAAAAAGCCAGTGCAGGAATTGGCAAAGTCAAAGCAGTAGCAATTGCAGGT
GCACAGAAAGTGAAAAATGGCCCTTCTATGGTCATCAAATGGGTTAGGAGCAGATCACAA
AAGAAGAACTCTTCCATTTCATGA

Peptide Sequence

PEP ID

XP_016466528.1
PEP Infomation

PREDICTED: ankyrin repeat domain-containing protein 13C-like [Nicotiana tabacum]
Sequence

MSKPATTPAPASSTTIKPEDYSHSPVHYAVVLGDHSTLSRLVASVPRLVDPTQINTESHS
LSQERIADQISAVLDRRDNPNRETPLHLAVRLNDVYAARTLAVAGADISLQNAAGWNALQ
EAIMRRCSDVVSVLVQHHHLGAWSKWRRRLPRLVAVLRRMRDFYMEISFHFESSIVPFVG
KIAPSDTYKIWKRDGNLRADTSLAGYDGLKIQRANQSFLFLGDSDRNFDIPAGALLVLNH
DERKIYDAFENAGAPLSDSDVASFCNQTSVYRPGMDVTKSALVGRTNWRGQDKTENVGEW
KGRVYDVHNVVFSFRSRKITGAESEQILPLDLELEEDSEEGFLVAENPRFSVSTRPSATG
EGNRQRRHSSFIREEREFVTVSRKSVDIIPEPRRRTAAIPVAPPPNTKEKEYVKSLKPSV
WLTEQFPLKTEELLPLLDILANKVKAVRRMRELLTTKFPPGTFPVKLAIPVVPTVRVVIT
FTKFVELQPIEQFYTPFSSPSHLLNGAEDESSGSNYRSFPSSSSSSSSSWLSRSNSRSRS
SSKQPQQSSNGGQQADPFAIPGGYSWSSFDEKNRKMKKSKSTRRTKFSEFKDVEEMEKEG
SSYEDLIMATNGPSWADQWGAGGIGAIDEDESYYKSNKENGNNKKASAGIGKVKAVAIAG
AQKVKNGPSMVIKWVRSRSQKKNSSIS

Transcript Sequence

Gene sequence data has not been registered.